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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890407.1_cds_XP_016445095.1_40082
CDS Infomation

[gene=LOC107770315] [db_xref=GeneID:107770315] [protein=spermine synthase] [protein_id=XP_016445095.1] [location=join(22867..23074,23171..23215,24097..24173,24283..24405,27288..27392,27478..27550,27867..27938,28323..28515,28659..28788,29340..29432)] [gbkey=CDS]
Sequence

ATGGAGCACGACGCAGGAAGAGGTTTGGACAACCTGAAGATTATGGATGGGAAGGAGAGT
AAAAATGCTCATGCCAATGGATCAAATAAGGCTGTTGTTGTTCCCAATTGTTGCTTAAAG
GCTAGGGTTTATGACCCTGTGCTTGAAGCCAATTGCCACTCCACTGTCGTTTCCGGATGG
TTTTCTCAACCTCCACGGCCATCCTCTGATGAAAAGGAGAGGGTGTTGTATTTCAATAAT
CCAATGTGGCCAGGAGAAGCACATTCCCTGAAAGTAGAGAAGACTTTATTCAAGGGAAAG
TCAGAATTCCAGGAGGTCTTGGTTTTTGAGTCTGCATCATATGGGAAAGTTCTAGTGCTT
GATGGCATTGTTCAGTTGACTGAGAAAGATGAATGCGCCTATCAGGAGATGATAGCCCAT
CTTCCTCTTTGTTCAATCAAATCTCCTAGGAATGTTCTGGTTGTTGGGGGTGGTGATGGT
GGAGTTCTAAGGGAAATTTCTCGACATAGCTCCGTGGAGCTGATTGATATTTGTGAGATT
GATAAAATGGTTATAGATGTCAGTAAAAAGTTTTTCCCCTACTTGGCTATTGGCTTTGAG
GATCCTCGTGTCAATCTTCATGTTGGTGATGCTGTTGAGTTTCTACGGAATACCCCTGAA
GGGAAGTATGATGCTATCATAGTTGATTCATCAGATCCTGTTGGTCCGGCTCAAGAGCTT
GTGGAAAAACCATTCTTTGCAACGATAGCAAGGGCATTAAGACCTGGCGGTGTACTTTGC
AACATGGCAGAGAGCATGTGGCTTCATACACATCTTATTCAGGATATGATCTCAATTTGC
CGTGAAACATTTAGTTCTGTTCATTATGCATGGGCCAGTGTTCCTACATATCCTAGTGGT
GTTATTGGGTTTCTTCTGTGCTCGACCAAGGGACCACCTGTTGATTTTAAGCACCCTGTT
AATCCTATTGAGAAACTAGAGGGAGCTCTTCAGCACCAGAGGGAGCTTAGATTTTACAAT
TCTGAGATGCATGAAGCTGCCTTTGCGTTGCCCTCCTTTGTAAGGAGGGAGGTGAGCTAT
CTCCGTGATGTCCCACCTACTGAAGGAGTTAAGATTTAA

Peptide Sequence

PEP ID

XP_016445095.1
PEP Infomation

PREDICTED: spermine synthase [Nicotiana tabacum]
Sequence

MEHDAGRGLDNLKIMDGKESKNAHANGSNKAVVVPNCCLKARVYDPVLEANCHSTVVSGW
FSQPPRPSSDEKERVLYFNNPMWPGEAHSLKVEKTLFKGKSEFQEVLVFESASYGKVLVL
DGIVQLTEKDECAYQEMIAHLPLCSIKSPRNVLVVGGGDGGVLREISRHSSVELIDICEI
DKMVIDVSKKFFPYLAIGFEDPRVNLHVGDAVEFLRNTPEGKYDAIIVDSSDPVGPAQEL
VEKPFFATIARALRPGGVLCNMAESMWLHTHLIQDMISICRETFSSVHYAWASVPTYPSG
VIGFLLCSTKGPPVDFKHPVNPIEKLEGALQHQRELRFYNSEMHEAAFALPSFVRREVSY
LRDVPPTEGVKI

Transcript Sequence

Gene sequence data has not been registered.